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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Global gene expression profile of colon from wild-type and AE2-knockout mice.

ABSTRACT: The objective of this study was to identify changes in gene expression levels between wild-type and AE2-knockout colon. 7 wild-type and 7 AE2-null colon RNA samples were compared to identify genes that are differentially expressed in the colon of AE2 knockout mice. Total RNA was collected from both male and female wild-type and AE2-null colons (including both proximal and distal colon) when the mice were 18 days old. All pairs were gender- and aged-matched, and all mice were on a mixed 129 Black Swiss background. To facilitate statistical analysis and reduce any affects of Cy3 and Cy5 labeling, comparisons of two wild-type and two AE2-null samples were repeated using a dye flip.

ORGANISM(S): Mus musculus

SUBMITTER: Gary Shull

PROVIDER: E-GEOD-19075 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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AE2 Cl-/HCO3- exchanger is required for normal cAMP-stimulated anion secretion in murine proximal colon.

Gawenis Lara R LR Bradford Emily M EM Alper Seth L SL Prasad Vikram V Shull Gary E GE

American journal of physiology. Gastrointestinal and liver physiology 20100128 4

Anion secretion by colonic epithelium is dependent on apical CFTR-mediated anion conductance and basolateral ion transport. In many tissues, the NKCC1 Na(+)-K(+)-2Cl(-) cotransporter mediates basolateral Cl(-) uptake. However, additional evidence suggests that the AE2 Cl(-)/HCO(3)(-) exchanger, when coupled with the NHE1 Na(+)/H(+) exchanger or a Na(+)-HCO(3)(-) cotransporter (NBC), contributes to HCO(3)(-) and/or Cl(-) uptake. To analyze the secretory functions of AE2 in proximal colon, short-c ...[more]

PMID: 20110461

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