Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Expression analysis of Shigella sonnei MS390 delta-rodZ mutant


ABSTRACT: Expression of type III secretion system (TTSS), a major determinant of virulence in Shigella, is markedly inhibited in a deletion mutant (cpxA) of the CpxAR two-component sensor at the level of post-transcriptional processing of the second TTSS regulator, InvE. A novel mutant of rodZ, which encodes a cytoskeletal protein involved in maintaining the rod-shaped morphology of bacilli, was isolated in a screen for mutations that restored TTSS expression in a cpxA mutant. The rodZ mutants of Shigella sonnei efficiently expressed InvE at 30°C, a temperature at which expression is normally repressed through temperature-dependent post-transcriptional regulation. Consistent with a marked increase in invE mRNA stability in the rodZ mutant, purified RodZ strongly bound to an invE RNA probe. Functional domain mapping indicated that the RNA binding activity of RodZ was dependent on a short basic region (KRRKKR) and multimer formation. Electron microscopy revealed that RodZ multimers formed filamentous superstructures, similar to another bacterial cytoskeletal protein, MreB. Our results indicate that RodZ functions as a novel membrane-bound RNA binding protein that provides a scaffold for post-transcriptional regulation. Phenotypic analysis of deletion mutant for RNA binding protein RodZ. The mutants analyzed in this study are further described in Jiro Mitobe, Itaru Yanagihara, Kiyouhisa Ohnishi, Akira Ishihama and Haruo Watanabe 2010. Bacterial cytoskeleton RodZ regulates post-transcriptional processing of Shigella type III secretion system. EMBO-J ( in submission). Four samples. Wild-type Shigella sonnei strain and the deletion mutant of rodZ gene, with or without rifampicin treatment for kinetics of mRNA stability.

ORGANISM(S): Shigella sonnei

SUBMITTER: Jiro Mitobe 

PROVIDER: E-GEOD-21051 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Similar Datasets

2011-03-31 | GSE21051 | GEO
2011-05-03 | GSE21788 | GEO
2011-05-03 | E-GEOD-21788 | biostudies-arrayexpress
2011-06-01 | E-GEOD-25459 | biostudies-arrayexpress
2011-06-13 | E-GEOD-26806 | biostudies-arrayexpress
2015-11-21 | E-GEOD-75237 | biostudies-arrayexpress
2014-05-03 | GSE55037 | GEO
2015-09-23 | E-GEOD-73315 | biostudies-arrayexpress
2013-01-02 | E-GEOD-35236 | biostudies-arrayexpress
2011-06-13 | GSE26806 | GEO