Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Comparison of polyribosomal to total transcript profiles


ABSTRACT: Total and polyribosomal RNA was extracted from rosette leaves of 5-6-week-old wild-type and transgenic Arabidopsis plants (ecotype Col-0). After linear amplification using a modified Eberwine procedure, Cy3- or Cy5-labeled cDNA targets were produced from sense-strand RNA through reverse transcription

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: David Galbraith 

PROVIDER: E-GEOD-2132 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Immunopurification of polyribosomal complexes of Arabidopsis for global analysis of gene expression.

Zanetti María Eugenia ME   Chang Ing-Feng IF   Gong Fangcheng F   Galbraith David W DW   Bailey-Serres Julia J  

Plant physiology 20050601 2


Immunoaffinity purification of polyribosomes (polysomes) from crude leaf extracts of Arabidopsis (Arabidopsis thaliana) was achieved with transgenic genotypes that overexpress a translational fusion of a ribosomal protein (RP) with a His(6)-FLAG dual epitope tag. In plants with a cauliflower mosaic virus 35S:HF-RPL18 transgene immunopurification with anti-FLAG agarose beads yielded 60-Svedberg ribosomal subunits, intact 80-Svedberg monosomes and polysomes. Sucrose density gradient fractionation  ...[more]

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