Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

Cotranscriptional exon skipping in the genotoxic stress response


ABSTRACT: Pre-mRNA splicing is functionally coupled to transcription, and genotoxic stresses can enhance alternative exon inclusion by affecting elongating RNA polymerase II. We report here that various genotoxic stress inducers, including camptothecin, inhibit the interaction between EWS, an RNA polymerase II-associated factor, and YB-1, a spliceosome-associated factor. This results in the cotranscriptional skipping of several exons of the MDM2 gene encoding the main p53 ubiquitin-ligase. This reversible exon skipping participates in the timely regulation of MDM2 expression, and may contribute to the accumulation of p53 during stress exposure and its rapid shut off when stress is removed. Finally, a splicing-sensitive microarray identified numerous exons that are skipped in response to camptothecin

ORGANISM(S): Homo sapiens

SUBMITTER: Gabriel Sanchez 

PROVIDER: E-GEOD-21840 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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