Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Absolute expression level of Saccharomyces kluyveryii genes

ABSTRACT: Total RNA versus genomic DNA hybridization on custom arrays designed for all Saccharomyces kluyveryii genes Total RNA was collected in mid-log phase from Saccharomyces kluyveryii cells grown in rich medium (abbreviated CM, in house recipe). RNA was then converted to cDNA, Cy3-labeled and hybridized competitively against Cy5 labeled genomic DNA from Saccharomyces kluyveryii.

ORGANISM(S): Saccharomyces kluyveri NRRL Y-12651

SUBMITTER: Alex Tsankov 

PROVIDER: E-GEOD-22202 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Json Xml
altmetric image

Publications

The role of nucleosome positioning in the evolution of gene regulation.

Tsankov Alexander M AM   Thompson Dawn Anne DA   Socha Amanda A   Regev Aviv A   Rando Oliver J OJ  

PLoS biology 20100706 7

Chromatin organization plays a major role in gene regulation and can affect the function and evolution of new transcriptional programs. However, it can be difficult to decipher the basis of changes in chromatin organization and their functional effect on gene expression. Here, we present a large-scale comparative genomic analysis of the relationship between chromatin organization and gene expression, by measuring mRNA abundance and nucleosome positions genome-wide in 12 Hemiascomycota yeast spec  ...[more]

Similar Datasets

Transcriptomics Absolute expression level of Saccharomyces mikatae genes
2010-07-06 | E-GEOD-22201 | biostudies-arrayexpress
Transcriptomics Absolute expression level of Saccharomyces bayanus genes
2010-07-06 | E-GEOD-22205 | biostudies-arrayexpress
Transcriptomics Absolute expression level of Saccharomyces paradoxus genes
2010-07-06 | E-GEOD-22193 | biostudies-arrayexpress
Transcriptomics Absolute expression level of Saccharomyces castellii genes
2010-07-06 | E-GEOD-22200 | biostudies-arrayexpress
Transcriptomics Absolute expression level of Kluyveromyces waltii genes
2010-07-06 | E-GEOD-22199 | biostudies-arrayexpress
Transcriptomics Absolute expression level of Candida glabrata genes
2010-07-06 | E-GEOD-22194 | biostudies-arrayexpress
Transcriptomics Absolute expression level of Debaryomyces hansenii genes
2010-07-06 | E-GEOD-22191 | biostudies-arrayexpress
Transcriptomics Absolute expression level of Yarrowia lipolytica genes
2010-07-06 | E-GEOD-22192 | biostudies-arrayexpress
Transcriptomics Absolute expression level of Candida albicans genes
2010-07-06 | E-GEOD-22197 | biostudies-arrayexpress
Transcriptomics Absolute expression level of Kluyveromyces lactis genes
2010-07-06 | E-GEOD-22198 | biostudies-arrayexpress