Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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A Novel Model of Common TLR4- and Injury induced transcriptional themes in Human Leukocytes (supported by NIH grant GM34695)


ABSTRACT: Fifteen human volunteer subjects (18-40 years of age) and 5 Trauma patients were studied. One volunteer group (saline + LPS [n = 8]) received a 12 hour infusion a second volunteer group (cortisol + LPS [n = 7]) received a 12 hour infusion of cortisol (3 µg/kg/min). After 6 hours of saline or cortisol infusion, intravenous lipopolysaccharide (2 ng/kg) was administered to all subjects. Blood samples were collected at 0 hours, 6 hours and 24 hours relative to LPS administration at 0 hours. Blood samples were drawn from a grounp of Trauma patients shortly (day1-5) after admission and later in their ICU stay (day 5-7). Leukocytes were isolated from these blood samples, total RNA extracted, and microarray analyses performed using Affymetrix Focus GeneChips® on samples yeilding sufficent quantity and quality RNA for analysis. Blood samples were collected at 0hr, 6hr, and 24hr in relation to the LPS infusion. For both saline and cortisol treated subjects, infusion was started at (-6) hr and continued to (+6) hr.

ORGANISM(S): Homo sapiens

SUBMITTER: Stephen Lowry 

PROVIDER: E-GEOD-22278 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

A novel model of common Toll-like receptor 4- and injury-induced transcriptional themes in human leukocytes.

Haimovich Beatrice B   Reddell Michael T MT   Calvano Jacqueline E JE   Calvano Steve E SE   Macor Marie A MA   Coyle Susette M SM   Lowry Stephen F SF  

Critical care (London, England) 20101007 5


<h4>Introduction</h4>An endotoxin challenge, sepsis, and injury/trauma, trigger significant changes in human peripheral blood leukocytes (PBL) gene expression. In this study, we have sought to test the hypothesis that the Toll-like receptor 4 (TLR4) induced transcription patterns elicited in humans exposed to in vivo endotoxin would parallel gene expression patterns observed in trauma patients with initial non-infectious injury. In addition, we sought to identify functional modules that are comm  ...[more]

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