Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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MRNA Expression Profiling of pooled medulloblastoma samples


ABSTRACT: mRNA expression analysis of 4 different pools of medulloblastoma samples with characteristic cytogenetic aberrations Keywords: Genetic modification Comparison of tumor RNA 1 (equally represented, pooled mRNA of tumors with cytogenetic aberration 1) versus tumor RNA (equally represented, pooled mRNA of tumors without cytogenetic aberration 1). Whole-genome screening for differential gene expression.

ORGANISM(S): Homo sapiens

SUBMITTER: Stefan Pfister 

PROVIDER: E-GEOD-22823 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

HDAC5 and HDAC9 in medulloblastoma: novel markers for risk stratification and role in tumor cell growth.

Milde Till T   Oehme Ina I   Korshunov Andrey A   Kopp-Schneider Annette A   Remke Marc M   Northcott Paul P   Deubzer Hedwig E HE   Lodrini Marco M   Taylor Michael D MD   von Deimling Andreas A   Pfister Stefan S   Witt Olaf O  

Clinical cancer research : an official journal of the American Association for Cancer Research 20100422 12


<h4>Purpose</h4>Medulloblastomas are the most common malignant brain tumors in childhood. Survivors suffer from high morbidity because of therapy-related side effects. Thus, therapies targeting tumors in a specific manner with small molecules such as histone deacetylase (HDAC) inhibitors are urgently warranted. This study investigated the expression levels of individual human HDAC family members in primary medulloblastoma samples, their potential as risk stratification markers, and their roles i  ...[more]

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