Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

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Expression data from human NHL cell lines treated with agonistic antibodies


ABSTRACT: CD20 is a clinically validated target for Non-Hodgkin’s lymphomas and autoimmune diseases. Interactions of CD20 with the B cell receptor (BCR) and components of the BCR signaling cascade have been reported. In this study we show that antibodies against CD20 or activation of the BCR by specific antibodies induce very similar expression patterns of up- or down-regulated genes in NHL cell lines indicating that CD20 may play a role in BCR signaling and vice versa. We used microarray data to show that antibodies against CD20 or activation of the BCR by specific antibodies induce very similar expression patterns of up- or down-regulated genes in NHL cell lines indicating that CD20 may play a role in BCR signaling and vice versa. Four different cell lines were treated with various antibodies for 4h (3 replicates per treatment), all in all 96 arrays were analysed for 32 samples. Changes were calculated relative to control/reference experiments. Expression patterns of each treatment were compared to determine overlaps.

ORGANISM(S): Homo sapiens

SUBMITTER: Helmut Burtscher 

PROVIDER: E-GEOD-23394 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Antibodies against CD20 or B-cell receptor induce similar transcription patterns in human lymphoma cell lines.

Franke Andreas A   Niederfellner Gerhard J GJ   Klein Christian C   Burtscher Helmut H  

PloS one 20110218 2


<h4>Background</h4>CD20 is a cell surface protein exclusively expressed on B cells. It is a clinically validated target for Non-Hodgkin's lymphomas (NHL) and autoimmune diseases. The B cell receptor (BCR) plays an important role for development and proliferation of pre-B and B cells. Physical interaction of CD20 with BCR and components of the BCR signaling cascade has been reported but the consequences are not fully understood.<h4>Methodology</h4>In this study we employed antibodies against CD20  ...[more]

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