Differential genomic targeting of the transcription factor TAL1 in alternate hematopoietic lineages

ABSTRACT: TAL1/SCL is a master regulator of hematopoiesis whose expression promotes opposite outcomes depending on the cell type - differentiation in the erythroid lineage or oncogenesis in the T-cell lineage. Here we used a combination of ChIP-sequencing and gene expression profiling to compare the function of TAL1 in normal erythroid and leukemic T-cells. Analysis of the genome-wide binding properties of TAL1 in these two hematopoietic lineages revealed new insight into the mechanism by which transcription factors select their binding sites in alternate lineages. Our study shows limited overlap in the TAL1 binding profile between the two cell types with an unexpected preference for ETS and RUNX motifs adjacent to E-boxes in the T-cell lineage. Furthermore we show that TAL1 interacts with RUNX1 and

ORGANISM(S): Homo sapiens

SUBMITTER: Zizhen yao 

PROVIDER: E-GEOD-25000 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress