Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

MRNA Content of Human Sperm


ABSTRACT: BACKGROUND: In previous studies using candidate gene approaches, low sperm count (oligospermia) has been associated with altered sperm mRNA content and DNA methylation in both imprinted and non-imprinted genes. We performed a genome-wide analysis of sperm DNA methylation and mRNA content to test for associations with sperm function. METHODS AND RESULTS: Sperm DNA and mRNA were isolated from 21 men with a range of semen parameters presenting to a tertiary male reproductive health clinic. DNA methylation was measured with the Illumina Infinium array at 27,000 CpG loci. Unsupervised clustering of methylation data differentiated the 21 sperm samples by their motility values. Recursively partitioned mixture modeling (RPMM) of methylation data resulted in four distinct methylation profiles tha

ORGANISM(S): Homo sapiens

SUBMITTER: Sara Pacheco 

PROVIDER: E-GEOD-26881 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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