Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Landscape of somatic allelic imbalances and copy number alterations in human lung carcinoma


ABSTRACT: Lung cancer is the worldwide leading cause of death from cancer. This GEO series correspond to one of the BAC aCGH data sets used as validation cohort for the study: Landscape of somatic allelic imbalances and copy number alterations in human lung cancer, Int J Cancer 2012. Genomic profiling of 78 lung carcinomas using 32K BAC aCGH microarrays.

ORGANISM(S): Homo sapiens

SUBMITTER: Åke Borg 

PROVIDER: E-GEOD-29065 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Landscape of somatic allelic imbalances and copy number alterations in human lung carcinoma.

Staaf Johan J   Isaksson Sofi S   Karlsson Anna A   Jönsson Mats M   Johansson Leif L   Jönsson Per P   Botling Johan J   Micke Patrick P   Baldetorp Bo B   Planck Maria M  

International journal of cancer 20121020 9


Lung cancer is the worldwide leading cause of death from cancer and has been shown to be a heterogeneous disease at the genomic level. To delineate the genomic landscape of copy number alterations, amplifications, loss-of-heterozygosity (LOH), tumor ploidy and copy-neutral allelic imbalance in lung cancer, microarray-based genomic profiles from 2,141 tumors and cell lines including adenocarcinomas (AC, n = 1,206), squamous cell carcinomas (SqCC, n = 467), large cell carcinomas (n = 37) and small  ...[more]

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