Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

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Colorectal Cancer Cells


ABSTRACT: This SuperSeries is composed of the following subset Series: GSE29953: Colorectal Cancer Cell Lines aCGH GSE30026: CDX2 ChIP-seq GSE30181: COLO320 cells: siCDX2 vs. non-targeting control GSE30182: COLO320 DNA copy number analysis Refer to individual Series

ORGANISM(S): Homo sapiens

SUBMITTER: Keyan Salari 

PROVIDER: E-GEOD-30475 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

CDX2 is an amplified lineage-survival oncogene in colorectal cancer.

Salari Keyan K   Spulak Mary E ME   Cuff Justin J   Forster Andrew D AD   Giacomini Craig P CP   Huang Stephanie S   Ko Melissa E ME   Lin Albert Y AY   van de Rijn Matt M   Pollack Jonathan R JR  

Proceedings of the National Academy of Sciences of the United States of America 20121029 46


The mutational activation of oncogenes drives cancer development and progression. Classic oncogenes, such as MYC and RAS, are active across many different cancer types. In contrast, "lineage-survival" oncogenes represent a distinct and emerging class typically comprising transcriptional regulators of a specific cell lineage that, when deregulated, support the proliferation and survival of cancers derived from that lineage. Here, in a large collection of colorectal cancer cell lines and tumors, w  ...[more]

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