Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

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Transcription profiling of mouse transgenic tumors driven by Her or Ras


ABSTRACT: previously published mouse data; Pubmed IDS: 12754511, 12839964 Experiment Overall Design: see Black, EP, et.al., Cancer Res. 2003 Jul 1;63(13):3716-23 and Huang, E., et.al. Nat Genet. 2003 Jun;34(2):226-30.

ORGANISM(S): Mus musculus

SUBMITTER: Joseph Nevins 

PROVIDER: E-GEOD-3158 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Gene expression phenotypic models that predict the activity of oncogenic pathways.

Huang Erich E   Ishida Seiichi S   Pittman Jennifer J   Dressman Holly H   Bild Andrea A   Kloos Mark M   D'Amico Mark M   Pestell Richard G RG   West Mike M   Nevins Joseph R JR  

Nature genetics 20030601 2


High-density DNA microarrays measure expression of large numbers of genes in one assay. The ability to find underlying structure in complex gene expression data sets and rigorously test association of that structure with biological conditions is essential to developing multi-faceted views of the gene activity that defines cellular phenotype. We sought to connect features of gene expression data with biological hypotheses by integrating 'metagene' patterns from DNA microarray experiments in the c  ...[more]

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