Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

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Bacteriophage BFK 20 gene expression study


ABSTRACT: This microarray serie represents the complete gene expression study of bacteriophage BFK 20 during the infection of its host Brevibacterium flavum CCM 251. Gene expression was measured at fourteen time intervals (0, 1, 3, 5, 7, 10, 15, 20, 30, 40, 50, 60, 80 and 120 min) during phage infection according to proposed loop. Each sample was directly compared to the previous and to the next sample (point of total RNA isolation).

ORGANISM(S): Bacteriophage BFK20

SUBMITTER: Tomas Majtan 

PROVIDER: E-GEOD-3164 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Transcriptional profiling of bacteriophage BFK20: coexpression interrogated by "guilt-by-association" algorithm.

Majtan Tomas T   Halgasova Nora N   Bukovska Gabriela G   Timko Jozef J  

Virology 20061017 1


Global gene expression profiling of bacteriophage BFK20 infecting the industrial L-lysine producer Brevibacterium flavum CCM 251 was performed using DNA microarray. The relative gene expressions were measured in fourteen time samples collected during phage development. Phage genes were classified as early, middle, late or unassigned based on complex expression patterns during infection. Temporal classification of BFK20 genes was in concordance with previous predictions. However, proposed late re  ...[more]

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