Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Pinot Noir berry transcriptome during ripening.


ABSTRACT: Global gene expression analysis of grapevine cv. Pinot Noir berries during development and ripening. Time-course comparison of samples collected at three developmental stages (stages 33, 34 and 36 according to the modified E-L system, ref: Coombe BG, Aust J Grape Wine Res 1995, 1: 104-110) during three seasons (2003, 2005 and 2006). Data for each of the three seasons were normalized independently within each season, using gcRMA. PLEXdb (http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Stefania Pilati. The equivalent experiment is VV11 at PLEXdb. year: 2003 - developmental stage: UD:0000034 33E-L (3-replications); year: 2003 - developmental stage: UD:0000035 34E-L (3-replications); year: 2003 - developmental stage: UD:0000037 36E-L (3-replications); year: 2005 - developmental stage: UD:0000034 33E-L (3-replications); year: 2005 - developmental stage: UD:0000035 34E-L (3-replications); year: 2005 - developmental stage: UD:0000037 36E-L (3-replications); year: 2006 - developmental stage: UD:0000034 33E-L (3-replications); year: 2006 - developmental stage: UD:0000035 34E-L (3-replications); year: 2006 - developmental stage: UD:0000037 36E-L (3-replications)

ORGANISM(S): Vitis vinifera

SUBMITTER: Stefania Pilati 

PROVIDER: E-GEOD-31674 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Genome-wide transcriptional analysis of grapevine berry ripening reveals a set of genes similarly modulated during three seasons and the occurrence of an oxidative burst at vèraison.

Pilati Stefania S   Perazzolli Michele M   Malossini Andrea A   Cestaro Alessandro A   Demattè Lorenzo L   Fontana Paolo P   Dal Ri Antonio A   Viola Roberto R   Velasco Riccardo R   Moser Claudio C  

BMC genomics 20071122


<h4>Background</h4>Grapevine (Vitis species) is among the most important fruit crops in terms of cultivated area and economic impact. Despite this relevance, little is known about the transcriptional changes and the regulatory circuits underlying the biochemical and physical changes occurring during berry development.<h4>Results</h4>Fruit ripening in the non-climacteric crop species Vitis vinifera L. has been investigated at the transcriptional level by the use of the Affymetrix Vitis GeneChip w  ...[more]

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