Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of mouse SRF-null or control cardiomyocytes to study roles of the serum response factor in regulating contractile apparatus gene expression.


ABSTRACT: Serum Response Factor (SRF) is a transcriptional regulator required for mesodermal development. Numerous studies have implicated SRF as a central regulator of muscle gene expression and myogenesis. In this present study we used a loss of function approach to delineate the role of SRF in cardiac myocyte gene expression and function. In SRF null neonatal cardiomyocytes, we observe severe defects in the contractile apparatus, including Z-disc and stress fiber formation, as well as mislocalization and/or attenuation of sarcomeric proteins. Consistent with this, gene array and RT-PCR analyses show downregulation of genes encoding key cardiac transcriptional regulatory factors and proteins required for the maintenance of sarcomeric structure, function, and regulation. Chromatin IP analysis reveals that at least a subset of these proteins are likely regulated directly by SRF. Together the results presented here reveal new cellular and genetic mechanisms through which SRF exacts control over the contractile apparatus in cardiac myocytes. Experiment Overall Design: There are three control replicates (cardiomyocytes transduced with Adeno-GFP virus) and three experimental replicates (cardiomyocytes transduced with Adeno-CRE to excise SRF).

ORGANISM(S): Mus musculus

SUBMITTER: Ravi Misra 

PROVIDER: E-GEOD-3181 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Role of the serum response factor in regulating contractile apparatus gene expression and sarcomeric integrity in cardiomyocytes.

Balza Robert O RO   Misra Ravi P RP  

The Journal of biological chemistry 20051219 10


The serum response factor (SRF) is a transcriptional regulator required for mesodermal development, including heart formation and function. Previous studies have described the role of SRF in controlling expression of structural genes involved in conferring the myogenic phenotype. Recent studies by us and others have demonstrated embryonic lethal cardiovascular phenotypes in SRF-null animals, but have not directly addressed the mechanistic role of SRF in controlling broad regulatory programs in c  ...[more]

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