Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Genetics of gene expression in barley


ABSTRACT: Comparison of mRNA accumulation in segregating doubled haploid barley lines ****[PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, . The equivalent experiment is BB21 at PLEXdb.] genetic line: SM004(3-replications); genetic line: SM007(3-replications); genetic line: SM012(3-replications); genetic line: SM013(3-replications); genetic line: SM022(3-replications); genetic line: SM024(3-replications); genetic line: SM027(3-replications); genetic line: SM041(3-replications); genetic line: SM043(3-replications); genetic line: SM044(3-replications); genetic line: SM046(3-replications); genetic line: SM061(3-replications); genetic line: SM063(3-replications); genetic line: SM073(3-replications); genetic line: SM074(3-replications); genetic line: SM079(3-replications); genetic line: SM085(3-replications); genetic line: SM088(3-replications); genetic line: SM089(3-replications); genetic line: SM116(3-replications); genetic line: SM130(3-replications); genetic line: SM135(3-replications); genetic line: SM136(3-replications); genetic line: SM140(3-replications); genetic line: SM141(3-replications); genetic line: SM146(3-replications); genetic line: SM152(3-replications); genetic line: SM155(3-replications); genetic line: SM160(3-replications); genetic line: SM167(3-replications); genetic line: SM169(3-replications); genetic line: SM173(3-replications); genetic line: SM177(3-replications); genetic line: SM184(3-replications); genetic line: SM200(3-replications); genetic line: Steptoe(3-replications); genetic line: Morex(3-replications)

ORGANISM(S): Hordeum vulgare

SUBMITTER:  

PROVIDER: E-GEOD-33394 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Gene expression quantitative trait locus analysis of 16 000 barley genes reveals a complex pattern of genome-wide transcriptional regulation.

Potokina Elena E   Druka Arnis A   Luo Zewei Z   Wise Roger R   Waugh Robbie R   Kearsey Mike M  

The Plant journal : for cell and molecular biology 20071017 1


Transcript abundance from cRNA hybridizations to Affymetrix microarrays can be used for simultaneous marker development and genome-wide gene expression quantitative trait locus (eQTL) analysis of crops. We have previously shown that it is easily possible to use Affymetrix expression arrays to profile individuals from a segregating population to accurately identify robust polymorphic molecular genetic markers. We applied the method to identify more than 2000 genetic polymorphisms (transcript deri  ...[more]

Publication: 1/2

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