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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Combined miRNA and mRNA Sequencing Identifies Protective Transcriptional Signature of Enhanced PI3Kalpha Signaling in Cardiac Hypertrophy

ABSTRACT: A molecular and bioinformatic pipeline permitting comprehensive analysis and quantification of myocardial miRNA and mRNA expression with next-generation sequencing was developed and the impact of enhanced PI3Kalpha signaling on the myocardial transcriptome signature of pressure overload-induced pathological hypertrophy was explored. miRNA and mRNA-Seq were carried out in four groups of mouse LV samples: WT sham, WT+TAC, caPI3Kalpha sham, caPI3Kalpha+TAC

ORGANISM(S): Mus musculus

SUBMITTER: Kai-Chien Yang

PROVIDER: E-GEOD-35350 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Combined deep microRNA and mRNA sequencing identifies protective transcriptomal signature of enhanced PI3Kα signaling in cardiac hypertrophy.

Yang Kai-Chien KC Ku Yuan-Chieh YC Lovett Michael M Nerbonne Jeanne M JM

Journal of molecular and cellular cardiology 20120511 1

The perturbation of myocardial transcriptome homeostasis is the hallmark of pathological hypertrophy, underlying the maladaptive myocardial remodeling secondary to pathological stresses. Classic and novel therapeutics that provide beneficial effects against pathological remodeling likely impact myocardial transcriptome architecture, including miRNA and mRNA expression profiles. Microarray and PCR-based technologies, although employed extensively, cannot provide adequate sequence coverage or quan ...[more]

PMID: 22580345

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