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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Microarray gene expression profiling in central neurocytomas

ABSTRACT: Microarray gene expression profiling of central neurocytomas (CNs). Comparison between neurocytoma, pineocytoma (PC) and pineoblastoma (PB) relative to normal brain. Gene expression analysis was performed on tumor samples. Tumor tissues of 5 CNs, 2 PCs (low-grade pineal parenchymal tumors (PPTs)) and 2 PBs (high-grade PPTs) were obtained from the NeurobiotecBank (Groupement Hospitalier Est, Bron, France) or from the AP-HM Tissue Bank (Assistance Publique-HM-CM-4pitaux de Marseille, France). At surgery, the tumor tissue was divided into 2 fragments, one of which was frozen and stored in liquid nitrogen for RNA extraction, whereas the other was fixed for histopathologic analysis.

ORGANISM(S): Homo sapiens

SUBMITTER: jacques champier

PROVIDER: E-GEOD-35499 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Molecular characterization of central neurocytomas: potential markers for tumor typing and progression.

Vasiljevic Alexandre A Champier Jacques J Figarella-Branger Dominique D Wierinckx Anne A Jouvet Anne A Fèvre-Montange Michelle M

Neuropathology : official journal of the Japanese Society of Neuropathology 20120723 2

Central neurocytomas (CNs) are rare intraventricular tumors presenting a favorable prognosis after surgery. Their transcriptomic profile is poorly characterized. We performed a microarray transcriptomic study to search for molecular markers that might improve diagnostic accuracy. Microarray analysis was performed on five CNs (3 primary and 2 recurrent CNs) using CodeLink human whole genome bioarrays, and the gene expression in CNs was compared with that in four pineal parenchymal tumors, consist ...[more]

PMID: 22816789

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