Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Genotyping Tool for Studying Epidemiologically Related Isolates


ABSTRACT: Replicates of strains used in comparison of microarray to RAPD analysis for the publication. Findings from use of an open-reading frame-specific Campylobacter jejuni DNA microarray to investigate genetic diversity among clinical isolates associated with 5 independent clusters of infection were compared with data from random amplified polymeric DNA (RAPD) and Penner serotyping analyses. The DNA microarray provides a highly specific epidemiological typing tool for analysis of C. jejuni isolates and reveals both divergent and highly conserved gene classes among isolates Set of arrays that are part of repeated experiments Biological Replicate Computed

ORGANISM(S): Campylobacter jejuni

SUBMITTER: Nina Salama 

PROVIDER: E-GEOD-3610 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Use of an open-reading frame-specific Campylobacter jejuni DNA microarray as a new genotyping tool for studying epidemiologically related isolates.

Leonard Edward E EE   Takata Tohru T   Blaser Martin J MJ   Falkow Stanley S   Tompkins Lucy S LS   Gaynor Erin C EC  

The Journal of infectious diseases 20030129 4


Findings from use of an open-reading frame-specific Campylobacter jejuni DNA microarray to investigate genetic diversity among clinical isolates associated with 5 independent clusters of infection were compared with data from random amplified polymeric DNA (RAPD) and Penner serotyping analyses. The DNA microarray provides a highly specific epidemiological typing tool for analysis of C. jejuni isolates and reveals both divergent and highly conserved gene classes among isolates. ...[more]

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