Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

CEACAM6 is a PDEF induced gene in breast cancer


ABSTRACT: Identifying PDEF regulated genes may shed light on the mechanism by which PDEF may induce breast cancer progression. To that purpose, we have used the MCF-7 human breast tumor cell line model to identify PDEF induced genes. Briefly, PDEF expression was down regulated by shRNA in MCF-7 cells and RNA probes from PDEF-down regulated and control MCF-7 cells were used to screen the Affymetrics HG-U133A Gene Chips. This analysis found 62 genes that were induced 2-fold or higher by PDEF. Further analysis of 3 of these genes namely S100A7, CEACAM6 and B7-H4 in primary breast tumors showed CEACAM6 as a frequently elevated and co-exressed gene with PDEF in these tumors. We previously reported a role for PDEF (prostate derived Ets transcription factor) in breast tumor progression and its association

ORGANISM(S): Homo sapiens

SUBMITTER: Ashwani Sood 

PROVIDER: E-GEOD-37662 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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