Methylation Changes in Soybean Early Maturation Seed Compartments Using LCM
Ontology highlight
ABSTRACT:
ORGANISM(S): Glycine max
SUBMITTER: Brandon Le
PROVIDER: E-GEOD-37893 | biostudies-arrayexpress |
REPOSITORIES: biostudies-arrayexpress
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Project description:What methylation changes are occurring in different compartments of early maturation stage seed largely remains unknown. To uncover the possible role of DNA methylation in different compartments of early maturation stage seed, we characterized the methylome of two major compartments (abaxial parenchyma and adaxial parenchyma) in embryonic cotyledon, four major compartments (parenchyma, plumule, root tip, and vascular) in embryonic axis, and seed coat layers (parenchyma and palisade) using Illumina sequencing. The whole seed coat and embryonic cotyledons were captured using LCM to serve as controls.
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