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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Cdk11-Cyclin L controls the assembly of the RNA polymerase II Mediator [expression]

ABSTRACT: The L-Mediator is a general co-activator of RNA Polymerase II transcription and is formed by the reversible association of the S-Mediator and the kinase module harbouring Cdk8. We describe the Cdk11-Lcp1 complex and show that its inactivation alter the global expression profiles in a very similar way than mutations of the kinase module. Cdk11 is broadly distributed onto chromatin and phosphorylate the Med27 and Med4 Mediator subunits on conserved residues. The inactivation of either Cdk11 or the mutation of its target residues on the Mediator leads to a strongly decreased association of the kinase module and the S-Mediator. The results show that Cdk11-Lcp1 regulates that assembly of the L-Mediator complex. Total RNA was isolated from two biological replicates for all conditions, and each biological replicate was hybridized in duplicate on Agilent arrays (dye-swap).

ORGANISM(S): Schizosaccharomyces pombe

SUBMITTER: Harm Bakel

PROVIDER: E-GEOD-37960 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Cdk11-cyclinL controls the assembly of the RNA polymerase II mediator complex.

Drogat Julie J Migeot Valérie V Mommaerts Elise E Mullier Caroline C Dieu Marc M van Bakel Harm H Hermand Damien D

Cell reports 20121101 5

The large Mediator (L-Mediator) is a general coactivator of RNA polymerase II transcription and is formed by the reversible association of the small Mediator (S-Mediator) and the kinase-module-harboring Cdk8. It is not known how the kinase module association/dissociation is regulated. We describe the fission yeast Cdk11-L-type cyclin pombe (Lcp1) complex and show that its inactivation alters the global expression profile in a manner very similar to that of mutations of the kinase module. Cdk11 i ...[more]

PMID: 23122962

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Cdk11-Cyclin L controls the assembly of the RNA polymerase II Mediator [ChIP-chip]

Project description:The L-Mediator is a general co-activator of RNA Polymerase II transcription and is formed by the reversible association of the S-Mediator and the kinase module harbouring Cdk8. We describe the Cdk11-Lcp1 complex and show that its inactivation alter the global expression profiles in a very similar way than mutations of the kinase module. Cdk11 is broadly distributed onto chromatin and phosphorylate the Med27 and Med4 Mediator subunits on conserved residues. The inactivation of either Cdk11 or the mutation of its target residues on the Mediator leads to a strongly decreased association of the kinase module and the S-Mediator. The results show that Cdk11-Lcp1 regulates that assembly of the L-Mediator complex. Two independent immunoprecipitations were done for HA-tagged Cdk11 and each biological replicate was hybridized in duplicate on Agilent arrays using input DNA as the reference channel.

2014-07-11 | E-GEOD-37961 | biostudies-arrayexpress

Cdk11-Cyclin L controls the assembly of the RNA polymerase II Mediator [ChIP-chip]

2014-07-11 | GSE37961 | GEO

Cdk11-Cyclin L controls the assembly of the RNA polymerase II Mediator [expression]

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A study of Mediator subunit enhancer-promoter binding

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