Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

5 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Stump project-- miRNA whole tissue; Volar versus non-volar acral skin gene expression

ABSTRACT: To broaden our understanding of the gene expression common to volar skin, we biopsied the dorsum of the hand, palm, dorsum of the foot and sole and collected miRNA for chip anlayses total of 16 skin biopsy samples with 4 repeats from distinct individuals of each site: dorsum of hand, palm, dorstum of foot and sole

ORGANISM(S): Homo sapiens

SUBMITTER: Luis Garza

PROVIDER: E-GEOD-38732 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Stump project -- methylation whole tissue; volar versus non-volar acral skin gene expression

Project description:To broaden our understanding of the gene expression common to volar skin, we biopsied the dorsum of the hand, palm, dorsum of the foot and sole and collected DNA for methylation chip anlayses Total of 12 skin biopsy samples with 3 repeats from distinct individuals of each site: dorsum of hand, palm, dorstum of foot and sole. The samples below represent methylation data only.

2013-07-03 | E-GEOD-39131 | biostudies-arrayexpress

Stump project-- miRNA whole tissue; Volar versus non-volar acral skin gene expression

2013-07-03 | GSE38732 | GEO

Stump project -- methylation whole tissue; volar versus non-volar acral skin gene expression

2013-07-03 | GSE39131 | GEO

Stump project-- mRNA whole tissue; Volar versus non-volar acral skin gene expression

Project description:We were interesed in defining the gene signautre of volar skin. Whole skin punch biopsies of palms, backs of hand, soles and backs of feet were submitted for Affymetrix Exon arrays. 4 replicates of each site from distinct human donors were included; total of 16 samples analyzed.

2013-07-01 | E-GEOD-34756 | biostudies-arrayexpress

Stump project -- mRNA fibroblasts; Volar versus non-volar acral skin gene expression

Project description:We were interested in defining the gene signature of volar skin. Dermal fibroblasts were expanded from punch biopsies of skin. We collected RNA from fibroblasts of palms, backs of hand, soles and backs of feet and submitted for Affymetrix Exon arrays. 3 replicates of each site from distinct human donors were included; because of 1 failed sample(Palm_rep2), total of 11 samples analyzed

2013-07-03 | E-GEOD-39266 | biostudies-arrayexpress

Stump project -- mRNA epidermis; Volar versus non-volar acral skin gene expression

Project description:We were interested in defining the gene signature of volar skin. Punch biopsies of skin were split into epidermis and dermis after dispase treatment. We collected RNA from epidermis of palms, backs of hand, soles and backs of feet and submitted for Affymetrix Exon arrays. 3 replicates of each site from distinct human donors were included; total of 12 samples analyzed

2013-07-03 | E-GEOD-39267 | biostudies-arrayexpress

Stump project-- mRNA dermis; Volar versus non-volar acral skin gene expression

Project description:We were interested in defining the gene signature of volar skin. Punch biopsies of skin were split into epidermis and dermis after dispase treatment. We collected RNA from dermis of palms, backs of hand, soles and backs of feet and submitted for Affymetrix Exon arrays. 3 replicates of each site from distinct human donors were included; total of 12 samples analyzed

2013-07-03 | E-GEOD-39743 | biostudies-arrayexpress

Stump project-- mRNA dermis; Volar versus non-volar acral skin gene expression

Project description:We were interested in defining the gene signature of volar skin.

2013-07-03 | GSE39743 | GEO

Stump project -- mRNA epidermis; Volar versus non-volar acral skin gene expression

Project description:We were interested in defining the gene signature of volar skin.

2013-07-03 | GSE39267 | GEO

Stump project -- mRNA fibroblasts; Volar versus non-volar acral skin gene expression

Project description:We were interested in defining the gene signature of volar skin.

2013-07-03 | GSE39266 | GEO