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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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MRNA profiles of WTAP siRNA-treated HUVECs

ABSTRACT: To examine the role of WTAP in splicing regulation, we performed high-throughput mRNA sequencing (RNA-seq) on RNA isolated from control, WTAP or Virilizer siRNA-treated HUVECs, yielding 12 million uniquely mapped 75nt pair-end tags from each sample. MapSplice software was used for differential expression and differences in transcript splice junctions . mRNA profiles of control, WTAP or Virilizer siRNA-treated HUVECs were generated by deep sequencing using Illumina GAII.

ORGANISM(S): Homo sapiens

SUBMITTER: Horiuchi Keiko

PROVIDER: E-GEOD-41180 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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mRNA profiles of WTAP siRNA-treated HUVECs

Project description:To examine the role of WTAP in splicing regulation, we performed high-throughput mRNA sequencing (RNA-seq) on RNA isolated from control, WTAP or Virilizer siRNA-treated HUVECs, yielding 12 million uniquely mapped 75nt pair-end tags from each sample. MapSplice software was used for differential expression and differences in transcript splice junctions .

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Project description:This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

2014-01-16 | E-GEOD-50583 | biostudies-arrayexpress

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Project description:mRNA profiles of WTAP siRNA-treated HUVECs

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