Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

8 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Developmental Changes in the Transcriptome of Human Cerebral Cortex Tissue: Long Noncoding RNA Transcripts

ABSTRACT: To examine the hypothesis that lncRNA expression varies with age, potentially paralleling 25 known developmental trends in synaptogenesis, myelination, and energetics, we quantified levels of nearly 6000 lncRNAs in 36 surgically resected human neocortical samples (primarily derived from temporal cortex) spanning infancy to adulthood. One-color (Alexa 555 green) microarray experiment was performed separately on each of the 36 surgically-resected human neocortical samples (primarily derived from temporal cortex) spanning infancy to adulthood. 8 probes per gene and 5 on-chip replicates for each probe.

ORGANISM(S): Homo sapiens

SUBMITTER: Hui JIA

PROVIDER: E-GEOD-43639 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Developmental Changes in the Transcriptome of Human Cerebral Cortex Tissue: Long Noncoding RNA Transcripts

Project description:To examine the hypothesis that lncRNA expression varies with age, potentially paralleling 25 known developmental trends in synaptogenesis, myelination, and energetics, we quantified levels of nearly 6000 lncRNAs in 36 surgically resected human neocortical samples (primarily derived from temporal cortex) spanning infancy to adulthood.

2013-01-19 | GSE43639 | GEO

Non-cancerous liver infiltrating lymphocytes of hepatitis C and tumor-infiltrating lymphocytes

Project description:Study goal is to disclose features of gene expressio profile of non-cancerous liver-infiltrating lymphocytes of type C hepatitis patients with hepatocellular carcinomas and tumor-infiltrating lymphocytes of type C hepatitis patients with hepatocellular carcinomas. Keywords: gene expression profile, non-cancerous liver-infiltrating lymphocytes, tumor-infiltrating lymphocytes, type C hepatitis, hepatocellular carcinoma Non-cancerous liver-infiltrating lymphocytes were obtained by laser capture microdissection from surgically resected liver tissues of 12 type C hepatitis patients with hepatocellular carcinoma. The mRNA was amplified and expression profile was comprehensively analyzed with reference RNA using oligo-DNA chip. Tumor-infiltrating lymphocytes were obtained by laser capture microdissection from surgically resected cancer tissues of 12 type C hepatitis patients with hepatocellular carcinoma. The mRNA was amplified and expression profile was comprehensively analyzed with reference RNA using oligo-DNA chip.

2010-06-25 | E-GEOD-10461 | biostudies-arrayexpress

Spatial transcriptomics of human brain metastases

Project description:Spatial transcriptomics of six surgically-resected human brain metastasis samples

2021-08-04 | GSE179572 | GEO

Transcriptomes of NSCLCs

Project description:We performed RNA-seq using 46 human surgically-resected NSCLCs.

2021-12-10 | GSE190139 | GEO

Transcriptomes of lung adenocarcinomas

Project description:We performed RNA-seq using 23 human surgically-resected gastric adenocarcinomas.

2022-01-31 | GSE152040 | GEO

Human hepatocellular carcinoma RNAseq data

Project description:This is a series of RNAseq data obtained from the predominant region of 29 treatment-naïve, surgically-resected human HCCs.

2021-09-25 | GSE183406 | GEO

MicroRNA expression in a chondroblastic osteosarcoma

Project description:A chondroblastic osteosarcoma was surgically resected. We performed small RNA sequencing to quantify the microRNAs/ small RNAs expression in the resulting library.

2021-08-13 | GSE98014 | GEO

Gene Expression Profiling of Malignant Peritoneal Mesothelioma Patient Tumor Samples

Project description:Gene expression profiles were generated from 41 consecutive surgically resected fresh frozen malignant peritoneal mesothelioma patient tumor samples to identify molecular prognostic factors.

2010-09-27 | GSE15627 | GEO

Transcriptomes of lung adenocarcinomas

Project description:We performed RNA-seq using 19 human surgically-resected lung adenocarcinomas to investigate of difference between EGFR-mutated and wild-type lung adenocarcinomas.

2020-02-25 | GSE141569 | GEO

lung carcinoid

Project description:Global gene expression of 13 frozen samples, 6 from typical and 7 from atypical surgically resected primary lung carcinoids All the patients not chemo-radio naïve and with a second tumor were excluded from the study. A written informed consent for research use of biological samples was obtained from all the patients. tissue biopsies

2013-02-08 | E-GEOD-35679 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data