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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Genome-wide analysis reveals CLF-regulated transcripts in Arabidopsis

ABSTRACT: CURLY LEAF (CLF), the major histone methyltransferase of Polycomb Repressive Complex 2 (PRC2), modifies trimethylation of histone H3 lysine 27 (H3K27me3) and mediates dynamical chromatin repression in Arabidopsis. Here we profiled Arabidopsis transcriptomes obtained from roots, leaves, flowers and siliques of Col-0 (As described under GEO ID: GSE38612) and clf-28 plants using RNA-seq. Our analysis uncovered 3835 transcription units were up-regulated in clf-28. Compared with ChIP-CHIP data, we found at least 42% of them were associated with H3K27me3. Transcriptom profiling in roots, leaves, flowers and siliques of clf-28 plants.

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Jun Liu

PROVIDER: E-GEOD-43983 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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