Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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The histone demethylase Jmjd3 sequentially associates with the transcription factors Tbx3 and Eomes to drive endoderm differentiation


ABSTRACT: Here we show that T-box proteins team up with chromatin modifying enzymes to drive the expression of the key lineage regulator, Eomes during endodermal differentiation of embryonic stem (ES) cells. The Eomes locus is maintained in a transcriptionally poised configuration in ES cells. During early differentiation steps, the ES cell factor Tbx3 associates with the histone demethylase Jmjd3 at the enhancer element of the Eomes locus to allow enhancer-promoter interactions. This spatial reorganization of the chromatin primes the cells to respond to Activin signaling, which promotes the binding of Jmjd3 and Eomes to its own bivalent promoter region to further stimulate Eomes expression in a positive feedback loop. Examination of the binding of pluripotency factors to mouse embryonic stem cells and embryoid bodies

ORGANISM(S): Mus musculus

SUBMITTER: April Kartikasari 

PROVIDER: E-GEOD-44764 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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The histone demethylase Jmjd3 sequentially associates with the transcription factors Tbx3 and Eomes to drive endoderm differentiation.

Kartikasari Apriliana E R AE   Zhou Josie X JX   Kanji Murtaza S MS   Chan David N DN   Sinha Arjun A   Grapin-Botton Anne A   Magnuson Mark A MA   Lowry William E WE   Bhushan Anil A  

The EMBO journal 20130412 10


Stem cell differentiation depends on transcriptional activation driven by lineage-specific regulators as well as changes in chromatin organization. However, the coordination of these events is poorly understood. Here, we show that T-box proteins team up with chromatin modifying enzymes to drive the expression of the key lineage regulator, Eomes during endodermal differentiation of embryonic stem (ES) cells. The Eomes locus is maintained in a transcriptionally poised configuration in ES cells. Du  ...[more]

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