Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

LMP2A mediated gene expression changes in transfected CD10+ GCB cells


ABSTRACT: In this study, we have investigated the effect of LMP2A on gene expression in normal human GC B cells using a non-viral vector based system Keywords: transfection of viral oncogene in normal human B cells Gene expression was compared between LMP2A-transfected and control vector-transfected GC B cells from three patients. RNA from the FACS-sorted transfected GC B cells was amplified. 10ug of fragmented cRNA was hybridized to HG-U133 Plus 2.0 microarrays. Differentially expressed probe sets were identified using limma with a fold change >1.3 and p < 0.01

ORGANISM(S): Homo sapiens

SUBMITTER: Wenbin Wei 

PROVIDER: E-GEOD-46143 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Suppression of the LMP2A target gene, EGR-1, protects Hodgkin's lymphoma cells from entry to the EBV lytic cycle.

Vockerodt Martina M   Wei Wenbin W   Nagy Eszter E   Prouzova Zuzana Z   Schrader Alexandra A   Kube Dieter D   Rowe Martin M   Woodman Ciaran B CB   Murray Paul G PG  

The Journal of pathology 20130801 4


Hodgkin's lymphoma is unusual among B cell lymphomas, in so far as the malignant Hodgkin/Reed-Sternberg (HRS) cells lack a functional B cell receptor (BCR), as well as many of the required downstream signalling components. In Epstein-Barr virus (EBV)-positive cases of Hodgkin's lymphoma, HRS cells express the viral latent membrane proteins (LMP)-1 and -2A. LMP2A is thought to contribute to the pathogenesis of Hodgkin's lymphoma by providing a surrogate BCR-like survival signal. However, LMP2A ha  ...[more]

Similar Datasets

2011-07-26 | E-GEOD-24044 | biostudies-arrayexpress
2013-04-19 | GSE46143 | GEO
2008-10-26 | E-GEOD-10821 | biostudies-arrayexpress
2011-07-26 | E-GEOD-27670 | biostudies-arrayexpress
2008-10-26 | E-GEOD-10831 | biostudies-arrayexpress
2015-10-01 | GSE71408 | GEO
2008-10-10 | GSE10821 | GEO
2020-09-22 | PXD018566 | Pride
2011-07-27 | GSE24044 | GEO
2023-02-04 | GSE25682 | GEO