Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Deep RNA Sequencing Reveals Dynamic Regulation of Myocardial Noncoding RNA in Failing Human Heart and Remodeling with Mechanical Circulatory Support


ABSTRACT: Complete transcriptome profiling in human failing and non-failing control hearts using next-gen sequencing Poly-A selected RNA and small RNA sequencing carried out in 5 groups of samples: NF, ICM, NICM, ICM+LVAD, NICM+LVAD

ORGANISM(S): Homo sapiens

SUBMITTER: Kai-Chien Yang 

PROVIDER: E-GEOD-46224 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Deep RNA sequencing reveals dynamic regulation of myocardial noncoding RNAs in failing human heart and remodeling with mechanical circulatory support.

Yang Kai-Chien KC   Yamada Kathryn A KA   Patel Akshar Y AY   Topkara Veli K VK   George Isaac I   Cheema Faisal H FH   Ewald Gregory A GA   Mann Douglas L DL   Nerbonne Jeanne M JM  

Circulation 20140115 9


<h4>Background</h4>Microarrays have been used extensively to profile transcriptome remodeling in failing human heart, although the genomic coverage provided is limited and fails to provide a detailed picture of the myocardial transcriptome landscape. Here, we describe sequencing-based transcriptome profiling, providing comprehensive analysis of myocardial mRNA, microRNA (miRNA), and long noncoding RNA (lncRNA) expression in failing human heart before and after mechanical support with a left vent  ...[more]

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