Integrated epigenomic analyses of enhancer as well as promoter regions in gastric cancer

ABSTRACT: To understand epigenetic changes in the distal regulatory as well as proximal regions, we performed RNA-seq, MBD-seq, and H3K27ac ChIP-seq on gastric tissues and cell lines. mRNA sequencing profiles of normal tissue (n), purified gastric cancer (sc), and cultured gastric cancer cell (dc) were generated by deep sequencing, in five samples from three patients (csc1, csc2, csc3) and two replicates (csc1_sc2, csc1_sc3), using Illumina GAIIx and HiSeq2000.

ORGANISM(S): Homo sapiens

SUBMITTER: sujin Baek 

PROVIDER: E-GEOD-46597 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress