Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Transcription profiling of Arabidopsis shoot apices

ABSTRACT: Comparisin of short day and long day growth conditions for wild-type Arabidopsis seeds (ecotype Col-0).

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Jose Alonso 

PROVIDER: E-GEOD-538 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Json Xml
altmetric image

Publications

Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Alonso José M JM   Stepanova Anna N AN   Leisse Thomas J TJ   Kim Christopher J CJ   Chen Huaming H   Shinn Paul P   Stevenson Denise K DK   Zimmerman Justin J   Barajas Pascual P   Cheuk Rosa R   Gadrinab Carmelita C   Heller Collen C   Jeske Albert A   Koesema Eric E   Meyers Cristina C CC   Parker Holly H   Prednis Lance L   Ansari Yasser Y   Choy Nathan N   Deen Hashim H   Geralt Michael M   Hazari Nisha N   Hom Emily E   Karnes Meagan M   Mulholland Celene C   Ndubaku Ral R   Schmidt Ian I   Guzman Plinio P   Aguilar-Henonin Laura L   Schmid Markus M   Weigel Detlef D   Carter David E DE   Marchand Trudy T   Risseeuw Eddy E   Brogden Debra D   Zeko Albana A   Crosby William L WL   Berry Charles C CC   Ecker Joseph R JR  

Science (New York, N.Y.) 20030801 5633

Over 225,000 independent Agrobacterium transferred DNA (T-DNA) insertion events in the genome of the reference plant Arabidopsis thaliana have been created that represent near saturation of the gene space. The precise locations were determined for more than 88,000 T-DNA insertions, which resulted in the identification of mutations in more than 21,700 of the approximately 29,454 predicted Arabidopsis genes. Genome-wide analysis of the distribution of integration events revealed the existence of a  ...[more]

Similar Datasets

Transcriptomics Arabidopsis shoot apices dissection
2003-08-06 | GSE538 | GEO
Transcriptomics Transgenic Arabidopsis expressing AtMYB23SRDX
2004-07-07 | GSE1544 | GEO
Proteomics Roles of proteome dynamics and cytokinin signaling in root-to-hypocotyl ratio changes induced by shading roots of Arabidopsis seedlings
2015-02-23 | PXD001612 | Pride
Transcriptomics Global gene expression of Arabidopsis lines with altered ANAC102 expression under normal and low oxygen conditions
2009-01-16 | GSE14420 | GEO
Transcriptomics Nitrate control of Arabidopsis seed dormancy
2007-05-31 | GSE7934 | GEO
Transcriptomics Gene expression of Arabidopsis leaves under heat stress and during recovery
2015-05-27 | E-GEOD-63128 | biostudies-arrayexpress
Methylation profiling Whole genome bisulfite sequencing of five-week-old Arabidopsis thaliana (ecotype Col-0) plants from water and jasmonic acid treated seedlings.
2022-11-07 | GSE163262 | GEO
Transcriptomics Long-lasting effect of jasmonic acid (JA) seedling treatment on the transcriptional response to JA challenge of five-week-old Arabidopsis thaliana (ecotype Col-0).
2022-11-07 | GSE163270 | GEO
Transcriptomics Comparison of drb2 mutant and wild-type shoot apex gene expression in Arabidopsis thaliana
2014-07-01 | E-MTAB-2586 | biostudies-arrayexpress
Transcriptomics Transcript profiling of different Arabidopsis thaliana ecotypes in response to Tobacco etch potyvirus infection
2012-07-04 | GSE37269 | GEO