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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Effect of Methyl jasmonate of the Poplar root transcriptome

ABSTRACT: Illumina HiSeq technology was used to generate mRNA profiles from Populus tremula x alba INRA 717-1B4 roots treated with Methyl jasmonate. Samples were harvested after two weeks either from untreated control roots or from Methyl jasmonate treated roots. Paired-end (2X100bp) reads were generated and aligned to the Populus trichocarpa (http://www.phytozome.net/poplar.php) using CLC Genomics Workbench 6. mRNA profiles from Populus tremula x alba INRA 717-1B4 roots treated with Methyl jasmonate as well as from control roots were generated by paired-end (2X100bp) Illumina HiSeq sequencing. Four samples were sequenced per lane, two biological replicates per treatment.

ORGANISM(S): Populus tremula x Populus alba

SUBMITTER: Annegret Kohler

PROVIDER: E-GEOD-56864 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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