Comparing Reference-Based RNA-Seq Mapping Methods for Non-Human Primate Data

ABSTRACT: We present a comparison of four reference-based mapping methods for mapping non-human primate data to a human reference sequence. We utilize TopHat2 and GSNAP for mapping to the human genome, and Bowtie2 and Stampy for mapping to the human genome and transcriptome for a total of six mapping approaches Comparison of reference-based mapping methods for 12 yellow baboons

ORGANISM(S): Papio cynocephalus

SUBMITTER: Geoffrey Ginsburg 

PROVIDER: E-GEOD-57485 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress