Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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UV (UVC, 10J/m2) light irradiation effect on Ewing Sarcoma cells


ABSTRACT: LAP-35 and SK-N_MC cells were treated with 10 J/m2 UV light versus untreated Alternative pre-mRNA processing plays a key role in the response to DNA damage as well as in neoplastic transformation. We found that two Ewing Sarcoma (ES) cell lines exhibit different sensitivity to UV light irradiation, with SK-N-MC cells being more sensitive than LAP-35 cells. RNA profiling during the response to low doses of UV light irradiation revealed genes differentially regulated between the two cell lines. In particular, UV light irradiation induced a novel isoform of the RNA helicase DHX9 which is targeted to nonsense-mediated decay (NMD) and therefore causes down-regulation of DHX9 in SK-N-MC cells, but not in LAP-35 cells. DHX9 protein forms a complex with RNA polymerase II (RNAPII) and EWS-FLI1 to e

ORGANISM(S): Homo sapiens

SUBMITTER: BELEN MINANA 

PROVIDER: E-GEOD-59889 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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