Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Comparison of poly(A) and capture RNA-seq: controlled degradation in vitro


ABSTRACT: We compare the performance of two library preparation protocols (poly(A) and exome capture) in in vitro degraded RNA samples VcaP cell were grown, and treated with MDV3100 (enzalutamide) or DHT (dihydrotestosterone), intact RNA was isolated and samples were prepared in technical triplicates using two library preparation protocol. Also cells were subject to in vitro degradation through incubation of the whole cell lysate in 37C for increasing amounts of time. Following incbation paired capture and poly(A) libraries were prepared.

ORGANISM(S): Homo sapiens

SUBMITTER: Marcin Cieslik 

PROVIDER: E-GEOD-64113 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Similar Datasets

2016-02-24 | E-GEOD-78201 | biostudies-arrayexpress
2016-03-31 | PXD003664 | Pride
2015-08-03 | GSE64113 | GEO
2010-10-20 | E-GEOD-22410 | biostudies-arrayexpress
2016-06-10 | E-GEOD-69896 | biostudies-arrayexpress
2023-09-20 | PXD040737 | Pride
2023-09-20 | PXD040696 | Pride
2021-05-29 | E-MTAB-10488 | biostudies-arrayexpress
2016-06-22 | E-GEOD-83595 | biostudies-arrayexpress
2023-10-17 | PXD043692 | Pride