Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

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Transcription profiling of chicken with experimentally induced myopia


ABSTRACT: One-day old white Leghorn chicks were housed in brooders with a 12 hr light:dark cycle, using General Electric chroma 50 fluorescent lighting with irradiance of approximately 50μW/cm2 at chick eye level. They received Purina Chick Chow food and water ad libitum. At one week of age and at the onset of the light phase, the chicks were anesthetized with inhalation ether, and a unilateral translucent white plastic goggle was glued to the periorbital feathers to induce ipsilateral form-deprivation myopia, alternating between the left or right eye. After either 6 hrs (n=8) or 3 days (n=8) of goggle wear, the chicks were killed by decapitation. The enucleated eyes were opened at the equator, and the retina/RPE was dissected together from both the goggled and control eyes. The tissues were individually frozen and stored in liquid nitrogen until processed Experiment Overall Design: Six biological replicates used for each: 3 day control retina, 3 day experimental, 6 hour control retina, and 6 hour experimental.

ORGANISM(S): Gallus gallus

SUBMITTER: Alice McGlinn 

PROVIDER: E-GEOD-6543 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Form-deprivation myopia in chick induces limited changes in retinal gene expression.

McGlinn Alice M AM   Baldwin Donald A DA   Tobias John W JW   Budak Murat T MT   Khurana Tejvir S TS   Stone Richard A RA  

Investigative ophthalmology & visual science 20070801 8


<h4>Purpose</h4>Evidence has implicated the retina as a principal controller of refractive development. In the present study, the retinal transcriptome was analyzed to identify alterations in gene expression and potential signaling pathways involved in form-deprivation myopia of the chick.<h4>Methods</h4>One-week-old white Leghorn chicks wore a unilateral image-degrading goggle for 6 hours or 3 days (n = 6 at each time). Total RNA from the retina/(retinal pigment epithelium) was used for express  ...[more]

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