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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Gene expression changes in greenhouse Hebeloma cylindrosporum-Pinus pinaster ectomycorrhizal root tips compared to Hebeloma cylindrosporum free-living mycelium

ABSTRACT: Illumina HiSeq technology was used to generate mRNA profiles from Hebeloma cylindrosporum ectomycorrhizal root tips compared to free-living mycelium . Ectomycorrhizal root tips were harvested after 6 months and used for RNA extraction. Reads of 100 bp were generated and aligned to Hebeloma cylindrosporum transcripts (http://genome.jgi-psf.org/Hebcy2) using CLC Genomics Workbench 6. mRNA profiles from Hebeloma cylindrosporum ectomycorrhizal root tips and free-living mycelium were generated by Illumina HiSeq2000 sequencing (100bp). Ttwo biological replicates were sequenced for mycorrhizal and mycelium samples.

ORGANISM(S): Hebeloma cylindrosporum

SUBMITTER: Annegret Kohler

PROVIDER: E-GEOD-66156 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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