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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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A single 3D chromatin compartment in amphioxus Hox cluster suggests a stepwise evolutionary origin for vertebrate Hox bimodal regulatory topologies

ABSTRACT: Comparison among vertebrates and the cephalochordate amphioxus Hox clusters architectures 4C-seq experiments from promoters spanning the amphioxus Hox cluster and the zebrafish hoxd cluster and surrounnding areas,

ORGANISM(S): Branchiostoma lanceolatum

SUBMITTER: Juan Tena

PROVIDER: E-GEOD-68737 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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A single 3D chromatin compartment in amphioxus Hox cluster suggests a stepwise evolutionary origin for vertebrate Hox bimodal regulatory topologies

Project description:Comparison among vertebrates and the cephalochordate amphioxus Hox clusters architectures

2015-12-16 | GSE68737 | GEO

Chromatin structure dynamics of hoxa13a, hoxa13b and hoxd13a loci during zebrafish development.

Project description:We designed 4C-Seq experiments for hoxa13a, hoxa13b and hoxd13a promoters in three developmental stages in zebrafish embryos: 24, 48 and 60 hpf. 4C-seq samples for three different hox13 genes promoters in three developmental stages in zebrafish embryos: 24, 48 and 60 hpf.

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Project description:A single 3D chromatin compartment in amphioxus Hox cluster suggests a stepwise evolutionary origin for vertebrate Hox bimodal regulatory topologies

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Obesity-associated variants within FTO form long-range functional connections with IRX3

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