Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

12 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Effects of selection on residual feed intake and diet on gene expression in pig tissues

ABSTRACT: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

ORGANISM(S): Sus scrofa

SUBMITTER: Annie Vincent

PROVIDER: E-GEOD-70839 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Effect of selection on residual feed intake and diet on gene expression in whole blood of pig

Project description:Transcriptional profiling in the whole blood of 48 pigs (132 days of age) originated from two lines divergently selected for residual feed intake (RFI) : low-RFI pigs (RFIneg), high-RFI pigs (RFIpl). Both lines were offered isocaloric and isoproteic diets with contrasted energy source and nutrients: low fat, low fiber (LF) diet or a high fat, high fiber (HF)diet during 10 weeks. Effects of RFI selection, diet and interaction between diet and line were investigated. Four experimental groups : low-RFI pigs fed high fat, high fiber diet (HF_RFIneg), high-RFI pigs fed high fat, high fiber diet(HF_RFIpl), low-RFI pigs fed low fat, low fiber diet (LF_RFIneg) and high-RFI pigs fed low fat, low fiber diet(LF_RFIpl). 12 pigs per condition. One replicate per array.

2016-07-01 | E-GEOD-70838 | biostudies-arrayexpress

Effects of selection on residual feed intake and diet on gene expression in pig perirenal adipose tissue

Project description:Transcriptional profiling in peritoneal adipose tissue of 48 pigs (132 days of age) originated from two lines divergently selected for residual feed intake (RFI) : low-RFI pigs (RFIneg), high-RFI pigs (RFIpl). Both lines were offered isocaloric and isoproteic diets with contrasted energy source and nutrients: low fat, low fiber (LF) diet or a high fat, high fiber (HF)diet during 10 weeks. Effects of RFI selection, diet and interaction between diet and line were investigated. Four experimental groups: low-RFI pigs fed high fat, high fiber diet (HF_RFIneg), high-RFI pigs fed high fat, high fiber diet(HF_RFIpl), low-RFI pigs fed low fat, low fiber diet (LF_RFIneg) and high-RFI pigs fed low fat, low fiber diet(LF_RFIpl). 12 pigs per condition. One replicate per array.

2016-07-01 | E-GEOD-70837 | biostudies-arrayexpress

Effects of selection on residual feed intake and diet on gene expression in pig subcutaneous adipose tissue

Project description:Transcriptional profiling in subcutaneous adipose tissue of 48 pigs aged (132 days of age) originated from two lines divergently selected for residual feed intake (RFI) : low-RFI pigs (RFIneg), high-RFI pigs (RFIpl). Both lines were offered isocaloric and isoproteic diets with contrasted energy source and nutrients: low fat, low fiber (LF) diet or a high fat, high fiber (HF)diet during 10 weeks. Effects of RFI selection, diet and interaction between diet and line were investigated. Four experimental groups: low-RFI pigs fed high fat, high fiber diet (HF_RFIneg), high-RFI pigs fed high fat, high fiber diet(HF_RFIpl), low-RFI pigs fed low fat, low fiber diet (LF_RFIneg) and high-RFI pigs fed low fat, low fiber diet(LF_RFIpl). 12 pigs per condition. One replicate per array.

2016-07-01 | E-GEOD-70836 | biostudies-arrayexpress

Effect of selection on residual feed intake on gene expression in porcine liver (115 kg body weight)

Project description:Transcriptional profiling in liver of 24 pigs of 115 kg body weight from lines divergently selected for residual feed intake (RFI): low-RFI pigs fed ad libitum (RFIneg), high-RFI pigs fed ad libitum (RFIpl) and high-RFI pigs restricted at RFIneg feeding level (RFIplR) to investigate the impact of feeding independently of selection. Three experimental conditions: low-RFI (RFIneg), high-RFI (RFIpl) and restricted-high RFI (RFIplR). 8 pigs per condition. One replicate per array.

2014-01-01 | E-GEOD-47767 | biostudies-arrayexpress

Effect of selection on residual feed intake on gene expression in porcine skeletal muscle (115 kg body weight)

Project description:Transcriptional profiling in liver of 24 pigs of 115 kg body weight from lines divergently selected for residual feed intake (RFI): low-RFI pigs fed ad libitum (RFIneg), high-RFI pigs fed ad libitum (RFIpl) and high-RFI pigs restricted at RFIneg feeding level (RFIplR) to investigate the impact of feeding independently of selection. Three experimental conditions: low-RFI (RFIneg), high-RFI (RFIpl) and restricted high-RFI (RFIplR). 8 pigs per condition except for RFIneg (7 pigs). One replicate per array.

2014-01-01 | E-GEOD-47769 | biostudies-arrayexpress

Effect of selection on residual feed intake on gene expression in pig subcutaneous adipose tissue (115 kg body weight)

Project description:Transcriptional profiling in subcutaneous adipose tissue of 24 pigs of 115 kg body weight from lines divergently selected for residual feed intake (RFI): low-RFI pigs (RFIneg), high-RFI pigs (RFIpl) and high-RFI pigs restricted at RFIneg feeding level (RFIplR) to investigate the impact of feeding independently of selection. Three conditions experiment: low-RFI (RFIneg), high-RFI (RFIpl) and restricted high-RFI (RFIplR). 8 pigs per condition. One replicate per array.

2014-01-01 | E-GEOD-47771 | biostudies-arrayexpress

Effect of selection on residual feed intake on gene expression in porcine liver (20 kg body weight)

Project description:Transcriptional profiling in liver of 16 pigs of 20 kg body weight from lines divergently selected for residual feed intake (RFI): low-RFI pigs (RFIneg), high-RFI pigs (RFIpl) . Two conditions experiment: low-RFI (RFIneg), high-RFI (RFIpl) . 8 pigs in RFIneg stain and 8 pigs in RFIpl stain . One replicate per array.

2014-01-01 | E-GEOD-47717 | biostudies-arrayexpress

Effect of selection on residual feed intake on gene expression in pig skeletal muscle (20 kg body weight)

Project description:Transcriptional profiling in skeletal muscle of 15 pigs of 20 kg body weight from lines divergently selected for residual feed intake (RFI): low-RFI pigs (RFIneg), high-RFI pigs (RFIpl) . Two conditions experiment: low-RFI (RFIneg), high-RFI (RFIpl) . 7 pigs in RFIneg stain and 8 pigs in RFIpl stain . One replicate per array.

2014-01-01 | E-GEOD-47768 | biostudies-arrayexpress

Effect of selection on residual feed intake on gene expression in porcine subcutaneous adipose tissue (20 kg body weight)

Project description:Transcriptional profiling in subcutaneous adipose tissue of 16 pigs of 20 kg body weight from lines divergently selected for residual feed intake (RFI): low-RFI pigs (RFIneg), high-RFI pigs (RFIpl) . Two conditions experiment: low-RFI (RFIneg), high-RFI (RFIpl) . 8 pigs in RFIneg stain and 8 pigs in RFIpl stain . One replicate per array.

2014-01-01 | E-GEOD-47770 | biostudies-arrayexpress

Post-weaning blood transcriptomic differences between Yorkshire pigs divergently selected for residual feed intake

Project description:Global gene expression profiles of peripheral blood of 35 to 42 day-old Yorkshire pigs with extremely low (more efficient) and high RFI (less efficient) values from two Iowa State University lines (the low RFI line, n = 15, and the high RFI line, n =16) that were divergently selected for RFI during the grow-finish phase were determined by Illumina RNA-seq (100 bp, paired-end) on the Hiseq2000 platform to explore the transcription biomarkers for feed efficiency in pigs.

2016-01-15 | E-MTAB-4179 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data