Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Human iPSC-based model for Duchenne muscular dystrophy


ABSTRACT: We developed a novel somite-based step-wise strategy for the efficient derivation of functional human myocytes, suggesting that past failures were due to incomplete specification. Treatment with two small molecules inhibiting glycogen synthase kinase 3β (GSK-3β) and the Notch signaling pathway in undifferentiated hPSCs results in the formation of somite-like cells by Day 4 and, subsequently contractile myotubes in vitro around Day 25 with the ability to engraft and actively participate in muscle repair in vivo. Antibody-based purification can enrich homogenous myocyte populations exhibiting genuine myogenic molecular and cellular characteristics, including extraocular muscle-like features. Furthermore, hPSCs derived from patients with multiple neuromuscular diseases successfully give rise to patient-specific skeletal muscle cells bearing signature phenotypes. Human embryonic stem cell were differentiated to skeletal muscle and compared to non-differentiated cells in triplicate biological replicates. For the confirmation of differentiated cell's characteristics and the global mRNA profiles, We used microarrays to detail the global programme of gene expression underlying cellularisation and identified distinct classes of up-regulated genes during this process. Further more, we used microarrys for the comparing control and disease gene expression profiles, again in triplicate.

ORGANISM(S): Homo sapiens

SUBMITTER: Gabsang Lee 

PROVIDER: E-GEOD-70955 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications


Duchenne muscular dystrophy (DMD) remains an intractable genetic disease. Althogh there are several animal models of DMD, there is no human cell model that carries patient-specific DYSTROPHIN mutations. Here, we present a human DMD model using human induced pluripotent stem cells (hiPSCs). Our model reveals concordant disease-related phenotypes with patient-dependent variation, which are partially reversed by genetic and pharmacological approaches. Our "chemical-compound-based" strategy successf  ...[more]

Similar Datasets

2016-06-16 | GSE70955 | GEO
2010-05-26 | E-MEXP-2200 | biostudies-arrayexpress
2021-09-08 | PXD015355 | Pride
2019-04-10 | GSE129505 | GEO
2015-03-29 | E-GEOD-56834 | biostudies-arrayexpress
2011-04-01 | E-GEOD-26867 | biostudies-arrayexpress
2015-10-26 | E-GEOD-71204 | biostudies-arrayexpress
2022-01-26 | GSE194214 | GEO
2013-06-01 | E-GEOD-38088 | biostudies-arrayexpress
2023-06-02 | MSV000092089 | MassIVE