Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

T cell help controls the speed of the cell cycle in germinal center B cells.


ABSTRACT: The germinal center (GC) is a microanatomical compartment wherein high-affinity antibody-producing B cells are selectively expanded. B cells proliferate and mutate their antibody genes in the dark zone (DZ) of the GC and are then selected by T cells in the light zone (LZ) on the basis of affinity. Here, we show that T cell help regulates the speed of cell cycle phase transitions and DNA replication of GC B cells. Genome sequencing and single-molecule analyses revealed that T cell help shortens S phase by regulating replication fork progression while preserving the relative order of replication origin activation. Thus, high-affinity GC B cells are selected by a mechanism that involves prolonged dwell time in the DZ where selected cells undergo accelerated cell cycles. To determine whether GC B cells receiving high levels of T cell help show a specific change in gene expression, we compared DZ cells in the G1 phase of the cell cycle from αDEC-OVA and control αDEC-CS treated GCs using a fluorescent ubiquitination-based cell cycle indicator (Fucci-tg). RNA sequencing revealed that T cell-mediated selection produced an increase in gene expression programs associated with the cell cycle, metabolism, including the metabolism of nucleotides, and genes downstream of c-Myc and the E2F transcription factors.

ORGANISM(S): Mus musculus

SUBMITTER: Thiago Oliveira 

PROVIDER: E-GEOD-71295 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

HUMORAL IMMUNITY. T cell help controls the speed of the cell cycle in germinal center B cells.

Gitlin Alexander D AD   Mayer Christian T CT   Oliveira Thiago Y TY   Shulman Ziv Z   Jones Mathew J K MJ   Koren Amnon A   Nussenzweig Michel C MC  

Science (New York, N.Y.) 20150716 6248


The germinal center (GC) is a microanatomical compartment wherein high-affinity antibody-producing B cells are selectively expanded. B cells proliferate and mutate their antibody genes in the dark zone (DZ) of the GC and are then selected by T cells in the light zone (LZ) on the basis of affinity. Here, we show that T cell help regulates the speed of cell cycle phase transitions and DNA replication of GC B cells. Genome sequencing and single-molecule analyses revealed that T cell help shortens S  ...[more]

Similar Datasets

2015-08-12 | GSE71295 | GEO
2015-12-04 | E-GEOD-69216 | biostudies-arrayexpress
2015-11-23 | E-GEOD-68043 | biostudies-arrayexpress
2016-08-23 | E-GEOD-80669 | biostudies-arrayexpress
2021-09-22 | GSE184475 | GEO
2017-03-21 | GSE93554 | GEO
2023-07-06 | GSE212542 | GEO
2023-07-06 | GSE212541 | GEO
2017-03-27 | GSE94733 | GEO
2012-09-24 | GSE38304 | GEO