Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Effects of eye opening on gene expression in the superficial layers of the rat superior colliculus

ABSTRACT: We performed RNA-seq on six samples of P20 Sprague Dawley rat superior colliculus, three control rats that underwent eye opening at P14 until P20 and three deprived rats which had their eyes glued closed from P14 until P20. Each sample was created from two pooled colliculi. RNA-seq of the superior colliculus with and without long term light deprivation.

ORGANISM(S): Rattus norvegicus

SUBMITTER: Rory Kirchner

PROVIDER: E-GEOD-72787 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Effects of eye opening on gene expression in the superficial layers of the rat superior colliculus

Project description:We performed RNA-seq on six samples of P20 Sprague Dawley rat superior colliculus, three control rats that underwent eye opening at P14 until P20 and three deprived rats which had their eyes glued closed from P14 until P20. Each sample was created from two pooled colliculi.

2015-09-09 | GSE72787 | GEO

GABAergic cell types in the superficial layers of the mouse superior colliculus.

Project description: Not available

| S-EPMC6888991 | biostudies-literature

Gene expression profiling of the superior olivary complex using serial analysis of gene expression

Project description:SAGE profile of the rat superior olivary complex (SOC). Rats were 60 days old (P60). Keywords: other

2004-12-12 | E-GEOD-2063 | biostudies-arrayexpress

Gene expression profiling of the superior olivary complex using serial analysis of gene expression

Project description:SAGE profile of the rat superior olivary complex (SOC). Rats were 60 days old (P60). Keywords: other

2004-12-13 | GSE2063 | GEO

Spatial updating in monkey superior colliculus in the absence of the forebrain commissures: dissociation between superficial and intermediate layers.

Project description: Not available

| S-EPMC2944681 | biostudies-literature

Contextual Feedback to Superficial Layers of V1.

Project description: Not available

| S-EPMC4612466 | biostudies-literature

Transcription profiling of superior mesenteric arteries from rats that have had portal vein ligation or a sham procedure for different lengths of time

Project description:Twenty-four male Sprague-Dawley rats were used for this experiment, a partial portal vein ligadure (PVL) was carried out in 12 rats, the other 12 rats were sham-operated. Superior mesenteric artery (SMA) samples were sequentially obtained from 2 rats from the PVL and sham groups at 1, 6, and 24 hours, and 3, 5 and 14 days after portal vein ligation or sham procedure. Each PVL sample was paired with its corresponding sham sample using a dye swap experiment design (technical replicates) resulting in 12 arrays (6 time points x 2 dye swap).

2008-05-09 | E-MEXP-1107 | biostudies-arrayexpress

mRNA-seq analysis of superficial zone (SFZ) and deeper layers (deep AC) of articular cartilage of adult rats

Project description:We compared gene expression profiles of SFZ and deep AC of articular cartilage through laser microdissection (LMD) using adhesive tape, linear amplification of mRNA, and mRNA-seq analysis. gene expression profiles of SFZ and deep AC obtained from the proximal tibia of two adult rats

2014-05-08 | E-GEOD-57377 | biostudies-arrayexpress