Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

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Small RNAs from the lycopod Selaginella moellendorffii


ABSTRACT: The small RNAs of Selaginella moellendorffii were sampled by direct pyrosequencing (454 Life Sciences). These data represent microRNAs, siRNAs, and other expressed small RNAs of ~18-~28 nts. in length. Keywords: Small RNA sequencing - high throughput One sample of above-ground tissues of greenhouse-grown S. moellendorffii was used to extract and sequence small RNAs.

ORGANISM(S): Selaginella moellendorffii

SUBMITTER: Michael Axtell 

PROVIDER: E-GEOD-7320 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Common functions for diverse small RNAs of land plants.

Axtell Michael J MJ   Snyder Jo Ann JA   Bartel David P DP  

The Plant cell 20070629 6


Endogenous small RNAs, including microRNAs (miRNAs) and short interfering RNAs (siRNAs), are critical components of plant gene regulation. Some abundant miRNAs involved in developmental control are conserved between anciently diverged plants, while many other less-abundant miRNAs appear to have recently emerged in the Arabidopsis thaliana lineage. Using large-scale sequencing of small RNAs, we extended the known diversity of miRNAs in basal plants to include 88 confidently annotated miRNA famili  ...[more]

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