Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

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Genome-wide distribution of UHRF2 and ZNF618 in 293T cells.


ABSTRACT: We have identified ZNF618 as a novel binding partner of UHRF2. We have found that UHRF2 and ZNF618 co-localize at many genomic loci. Examination of genome-wide distribution of SFB-tagged UHRF2 and ZNF618 in 293T cells using ChIP-seq.

ORGANISM(S): Homo sapiens

SUBMITTER: Lin-Yu Lu 

PROVIDER: E-GEOD-80037 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Zinc Finger Protein 618 Regulates the Function of UHRF2 (Ubiquitin-like with PHD and Ring Finger Domains 2) as a Specific 5-Hydroxymethylcytosine Reader.

Liu Yidan Y   Zhang Bin B   Kuang Henry H   Korakavi Gautam G   Lu Lin-Yu LY   Yu Xiaochun X  

The Journal of biological chemistry 20160427 26


5-Hydroxymethylcytosine (5hmC) is an epigenetic modification that is generated by ten-eleven translocation (TET) protein-mediated oxidation of 5-methylcytosine (5mC). 5hmC is associated with transcription regulation and is decreased in many cancers including melanoma. Accumulating evidence has suggested that 5hmC is functionally distinct from 5mC. Ubiquitin-like with PHD and ring finger domains 2 (UHRF2) is the first known specific 5hmC reader that has higher affinity to 5hmC than 5mC, suggestin  ...[more]

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