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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Complement protein C1q modulates macrophage molecular signaling and inflammatory responses during ingestion of atherogenic lipoproteins

ABSTRACT: C1q suppresses JAK-STAT signal transduction and activates PPAR-mediated transcription in macrophages during clearance of modified forms of LDL leading to a reduction in inflammatory response. Human monocyte-derived macrophages (HMDM) were incubated with either oxidized (oxLDL) or acetylated low-density lipoprotein (acLDL) in the presence or absence of C1q for 3 hours. Total RNA was extracted using the Qiagen RNeasy Mini Kit. RNA libraries were constructed using the Illumina TruSeq Stranded mRNA Sample Preparation Kit. Sequences were aligned to a reference genome (hg38), RPKM and raw counts were determined using CASAVA version 1.8.2.

ORGANISM(S): Homo sapiens

SUBMITTER: Deborah Fraser

PROVIDER: E-GEOD-80442 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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