Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Differentiation and specification of resident tissue macrophages [ID3-KO RNA-seq]


ABSTRACT: Tissue resident macrophages are functionally diverse cells that share an embryonic mesodermal origin. However, the mechanism(s) that control their specification remain unclear. We performed transcriptional, molecular and in situ spatio-temporal analyses of macrophage development in mice. We report that Erythro-Myeloid Progenitors generate pre-macrophages (pMacs) that simultaneously colonize the head and caudal embryo from embryonic day (E)9.5 in a chemokine-receptor dependent manner, to further differentiate into tissue F4/80+ macrophages. The core macrophage transcriptional program initiated in pMacs, is rapidly diversified in early macrophages as expression of transcriptional regulators becomes tissue-specific. For example, the preferential expression of the transcriptional regulator Id3 initiated in early fetal liver macrophages appears critical for Kupffer cell differentiation, as inactivation of Id3 causes a selective Kupffer cell deficiency that persists in adults. We propose that colonization of developing tissues by differentiating macrophages is immediately followed by their specification as they establish residence, hereby generating the macrophage diversity observed in post-natal tissues. RNA-sequencing of ID3+/- and ID3-/- Kupffer cells

ORGANISM(S): Mus musculus

SUBMITTER: Christoph Bock 

PROVIDER: E-GEOD-83854 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications


Tissue-resident macrophages support embryonic development and tissue homeostasis and repair. The mechanisms that control their differentiation remain unclear. We report here that erythro-myeloid progenitors in mice generate premacrophages (pMacs) that simultaneously colonize the whole embryo from embryonic day 9.5 in a chemokine-receptor-dependent manner. The core macrophage program initiated in pMacs is rapidly diversified as expression of transcriptional regulators becomes tissue-specific in e  ...[more]

Similar Datasets

2016-08-08 | GSE83854 | GEO
2016-08-08 | E-GEOD-81760 | biostudies-arrayexpress
2016-08-08 | E-GEOD-81686 | biostudies-arrayexpress
2016-08-08 | GSE81760 | GEO
2016-08-08 | GSE81686 | GEO
2023-11-14 | GSE234638 | GEO
2022-12-31 | GSE204922 | GEO
2019-08-14 | GSE135789 | GEO
2019-08-14 | GSE135788 | GEO
2022-02-17 | PXD028946 | Pride