Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

10 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcription profiling of human breast cancer cell line transfected with osteopontin vs empty vector

ABSTRACT: Osteopontin tranfected vs empty vector breast cell line

ORGANISM(S): Homo sapiens

SUBMITTER: Gregory Bloom

PROVIDER: E-GEOD-939 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Osteopontin vs empty vector

Project description:Osteopontin tranfected vs empty vector breast cell line Keywords: parallel sample

2004-01-07 | GSE939 | GEO

Transcription profiling of human breast cancer cell line transfected with osteopontin vs empty vector

Project description: Not available

| S-ECPF-GEOD-939 | biostudies-other

Expression data from human nasopharynx cell line transfected with gene or empty vector.

Project description:We used microarrays to detail the global gene expression in human nasopharynx cell line transfected with gene or empty vector.

2015-04-01 | GSE67456 | GEO

Gene expression in iPrEC cell line transfected with wild-type USP2A, mutant USP2A, or empty vector.

Project description:Gene expression was measured on the Affymetrix platform in iPrEC cell line transfected with wild-type USP2A, mutant USP2A, or empty vector.

2011-12-27 | GSE17466 | GEO

Transcription profiling of human HEK cells and hamster A23 cells transfected with Pcdh7 (a gene identified as a regulator of many genes) or empty vector to validate results of prediction of upregulated genes

Project description:We have mapped regulatory loci for nearly all protein coding genes in the mammalian genome using microarray measurements from a panel of mouse/hamster radiation hybrids. Proof of principle transfection experiment. Pcdh7 (a gene identified as being a regulator of many genes) is transfected into A23 and HEK cells and compared to A23 and HEK cells transfected with an empty vector. Upregulated genes predicted by our approach are compared with the transfection experiments Experiment Overall Design: There are 4 microarrays. The first two are biological replicates of A23 (transfected with Pcdh7, labeled with cy5) / A23 (tranfected with empty vector, labeled with cy3). The second two are biological replicates of HEK (transfected with Pcdh7, labeled with cy5) / HEK (tranfected with empty vector, labeled with cy3).

2008-04-03 | E-GEOD-9066 | biostudies-arrayexpress

Expression data from human nasopharynx cell line transfected with gene or empty vector.

Project description:We used microarrays to detail the global gene expression in human nasopharynx cell line transfected with gene or empty vector. human nasopharynx cell line transfected with gene or empty vector were for RNA extraction and hybridization on Affymetrix microarrays.

2015-04-01 | E-GEOD-67456 | biostudies-arrayexpress

MLE12 cell transcriptome analysis 12, 24, 48h after Notch 1-ICD overexpression with NICD1-pIRES-dsRed2 vector

Project description:To study the effect of Notch 1 overexpression on cell funtion and to elucidate involved signalling pathways MLE12 cells tranfected with NICD1-pIRES-dsRed2 vector were analyzed for their transcript profiles 12, 24, and 48h after transfection and related to an empty vector (EV) transfected control cells

2018-03-01 | GSE95856 | GEO

Homo sapiens

Project description:Osteopontin vs empty vector

| PRJNA87975 | ENA

Gene expression in iPrEC cell line transfected with wild-type USP2A, mutant USP2A, or empty vector.

Project description:Gene expression was measured on the Affymetrix platform in iPrEC cell line transfected with wild-type USP2A, mutant USP2A, or empty vector. Gene expression was measured in 3 distinct groups (cell transfected with wild-type USP2A, mutant USP2A, or the empty vector). For each group 5 biological replicates were obtained and gene expression was measured on the Affymetrix GeneChip Human Genome U133 Plus 2.0 Array. Differential gene expression was obtained for all the 3 possible pair-wise comparisons (WT versus MUT, WT versus EV, and MUT versus EV).

2011-12-27 | E-GEOD-17466 | biostudies-arrayexpress

Expression data from HeLa cell line transfected with TIPE1 or control vector

Project description:HeLa cells transfected with an empty vector or a TIPE1 lentiviral vector were collected for gene expression detection. Some of them, for instance, the expression of genes induced by p53 was dramatically decreased. We used microarrays to detail the gene expression after transfection with TIPE1 and identified distinct classes of changed genes during this process.

2018-10-10 | GSE120984 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data