Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

9 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcription profiling of Saccharomyces cerevisiae eIF4G isoforms to investigate eIF4G deletion transcript abundance

ABSTRACT: Effect of eIF4G gene deletion on transcript abundance.

ORGANISM(S): Saccharomyces cerevisiae

SUBMITTER: Bryan Clarkson

PROVIDER: E-MEXP-2400 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Transcription profiling of Saccharomyces cerevisiae eIF4G isoforms to investigate eIF4G deletion ribosome occupancy

Project description:Effect of eIF4G gene deletion on the ribosome occupancy.

2009-10-24 | E-MEXP-2399 | biostudies-arrayexpress

Transcription profiling of Saccharomyces cerevisiae eIF4G isoforms to investigate eIF4G homogenic polysome abundance

Project description:Effect of expressing a single eIF4G isoform at wild type levels on relative polysome abundance.

2009-10-14 | E-MEXP-2402 | biostudies-arrayexpress

Transcription profiling of Saccharomyces cerevisiae genomic DNA, nucleosomal DNA and the yeast strain to analyse diversity of eukaryotic DNA replication origins revealed by genome-wide analysis of chromatin structure

Project description:Genomic DNA from Saccharomyces cerevisiae W303-1A was isolated along with nucleosomal DNA from W303-1A and the yeast strain GAL:orc2-1. Nucleosomal DNA was isolated following a 2h release from a nocodazole block in which the medium was changed from galactose (YPAG) to glucose (YPAD).

2010-04-25 | E-MEXP-2369 | biostudies-arrayexpress

Expression of the Trehalose-6-phosphate Synthase 1 of Yeast Affects Gene Expression and Sugar Content in Potato Leaves

Project description:Effect of the TPS1 transgene on the transcriptome in potato

2011-08-17 | E-MEXP-3221 | biostudies-arrayexpress

Candida glabrata response to pH change

Project description:Transcriptional profiles of Candida glabrata exposed to two different pH values, 4.5 and 7, in complex medium.

2011-10-31 | E-MEXP-2974 | biostudies-arrayexpress

Depletion of eIF4G from yeast cells narrows the range of translational efficiencies genome-wide

Project description:Investigation of the effects of genetically depleting eIF4G from yeast cells on global translational efficiencies, using gene expresssion microarrays to measure the abundance of mRNA in polysomes relative to total mRNA for ~5900 genes Three biological replicates were examined (designated projects I, II, and III), representing heavy polysomes (HP), light polysomes (LP), and total RNA (T) preparations from three independent pairs of WT and eIF4G degron mutant cultures. Cy3-labeled cDNAs were generated from the 3 HP, 3 LP, and 3 total RNA samples prepared for each strain and the resulting 18 sets of cDNAs were used to probe three (technical) replicate whole-genome microarrays, containing multiple 60-mer oligonucleotides for each gene. The “normalized gene expression summary values” were calculated for each gene from the data obtained from the three technical replicates and used to calculate the translational efficiency (TE) of each gene as the ratio of the intensity values for HP to total RNA (HP/T) or LP to total RNA (LP/T) for each project.

2010-12-02 | E-GEOD-25721 | biostudies-arrayexpress

Effect of drought stress on potato leaf transcriptome

Project description:The effect of drought stress on wild-tpye and transgenic potato expressing the TPS1 gene of yeast was studied.

2012-06-01 | E-MEXP-3464 | biostudies-arrayexpress

Transcription profiling of Lactobacillus salivarius KS201 cholate response

Project description:cholate induced transcriptome of L. salivarius LS201

2009-07-17 | E-MEXP-2226 | biostudies-arrayexpress

Transcription profiling of Lactobacillus salivarius bile response_LS201

Project description:Porcine bile induced transcriptome of Lactobacillus salivarius

2009-07-16 | E-MEXP-2224 | biostudies-arrayexpress

Transcription profiling of Lactobacillus salivarius bile response_LS201bsh knockout

Project description:bile induced transcriptome of Lactobacillus salivarius LS201bsh ko.