Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

KT2440 wt vs. mut agmR -M9 plus glucose chloramphenicol-free medium

ABSTRACT: DNA microarrays were carried out to compare the transcriptional profiles of P. putida KT2440 and its isogenic knock-out mutant in agmR gene (mut agmR) when grown in M9 medium with glucose as a sole carbon source and in absense of chloramphenicol or any other stressor compound.

ORGANISM(S): Pseudomonas putida

SUBMITTER: Matilde Fernandez 

PROVIDER: E-MEXP-3203 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Json Xml
altmetric image

Publications

Mechanisms of resistance to chloramphenicol in Pseudomonas putida KT2440.

Fernández Matilde M   Conde Susana S   de la Torre Jesús J   Molina-Santiago Carlos C   Ramos Juan-Luis JL   Duque Estrella E  

Antimicrobial agents and chemotherapy 20111205 2

Pseudomonas putida KT2440 is a chloramphenicol-resistant bacterium that is able to grow in the presence of this antibiotic at a concentration of up to 25 μg/ml. Transcriptomic analyses revealed that the expression profile of 102 genes changed in response to this concentration of chloramphenicol in the culture medium. The genes that showed altered expression include those involved in general metabolism, cellular stress response, gene regulation, efflux pump transporters, and protein biosynthesis.  ...[more]

Similar Datasets

Transcriptomics KT2440 wt vs. Mut agmR chloramphenicol
2011-12-01 | E-MEXP-3206 | biostudies-arrayexpress
Transcriptomics T1E vs T1E Indole
2013-03-20 | E-MEXP-3819 | biostudies-arrayexpress
Transcriptomics KT2440 vs KT2440_NAH7
2012-07-27 | E-MEXP-3412 | biostudies-arrayexpress
Transcriptomics Transcription profiling by array of Pseudomonas putida KT2440 grown with or without chloramphenicol
2010-11-01 | E-MEXP-2831 | biostudies-arrayexpress
Transcriptomics Transcription profiling by array of Pseudomonas putida KT2440 during exponential phase growing in minimal medium with or without naphthalene
2010-11-01 | E-MEXP-2823 | biostudies-arrayexpress
Transcriptomics KT2440 vs. KT2440 _NAH7 Naphthalene
2012-07-27 | E-MEXP-3411 | biostudies-arrayexpress
Transcriptomics KT2440_Rhizosphere_Adaptation
2014-01-01 | E-MEXP-3804 | biostudies-arrayexpress
Transcriptomics Transcription profiling of Pseudomonas putida KT2440 and mutant PP4959 in the stationary phase of growth in LB
2010-06-01 | E-MEXP-2486 | biostudies-arrayexpress
Transcriptomics Transcription profiling of Pseudomonas putida KT2440 and mutant PP4959 in the rhizosphere
2010-06-01 | E-MEXP-2478 | biostudies-arrayexpress
Transcriptomics T1E PS28 vs T1E PS28 Indole
2013-03-15 | E-MEXP-3825 | biostudies-arrayexpress